boas_pucker - Network

🔬 Exploring RNA-seq data: from co-expression to cross-species comparison!#Bioinformatics #PlantSciences📑 Slides available here:...

🔬 Exploring RNA-seq data: from co-expression to cross-species comparison!
#Bioinformatics #PlantSciences
📑 Slides available here: https://github.com/bpucker/AppliedPlantTranscriptomics

@PuckerLab

Wrapping up our Applied Plant Transcriptomics course! From RNA-seq to de novo transcriptome assembly.#Bioinformatics #PlantSciences📑...

Wrapping up our Applied Plant Transcriptomics course! From RNA-seq to de novo transcriptome assembly.
#Bioinformatics #PlantSciences
📑 Slides available here: https://github.com/bpucker/AppliedPlantTranscriptomics
@PuckerLab

Seed color patterns in beans are due to sequence variants in genes encoding components of the MBW complex #FlavonoidFriday:...

Seed color patterns in beans are due to sequence variants in genes encoding components of the MBW complex #FlavonoidFriday: https://lnk.tu-bs.de/C0Mcgj

Last time teaching Applied Plant Transcriptomics at TU Braunschweig 🌱🧬Slides & resources:...

Last time teaching Applied Plant Transcriptomics at TU Braunschweig 🌱🧬
Slides & resources: https://github.com/bpucker/AppliedPlantTranscriptomics
#Bioinformatics #Transcriptomics
@PuckerLab

Our updated Victoria genome preprint now includes an 'Additional file 0.' Bioinformaticians, we thought you might appreciate...

Our updated Victoria genome preprint now includes an 'Additional file 0.' Bioinformaticians, we thought you might appreciate this—what do you think?
#OpenScience #Bioinformatics #Preprints
https://doi.org/10.1101/2024.06.15.599162
@PuckerLab

Excited to share our first 2025 publication in @GigaScience Data reuse in agricultural genomics research: challenges and...

Excited to share our first 2025 publication in @GigaScience

Data reuse in agricultural genomics research: challenges and recommendations
https://doi.org/10.1093/gigascience/giae106

#DataScience #FAIR @PuckerLab @tubraunschweig

Despite being listed as an author, I had no involvement in "writing" this book. It appears to include content taken from freely...

Despite being listed as an author, I had no involvement in "writing" this book. It appears to include content taken from freely available CC BY publications, including ours. To save $69, you can access our study for free in New Phytologist:
https://doi.org/10.1111/nph.19341
#OpenAccess #Anthocyanins

Happy New Year! Excited to announce that I have accepted an offer from Uni Bonn. @PuckerLab will continue our exciting research in Molecular...

Happy New Year! Excited to announce that I have accepted an offer from Uni Bonn. @PuckerLab will continue our exciting research in Molecular Plant Sciences at the IZMB in Bonn. Cannot wait to grow the team and dive into new collaborations & projects! 🌱🧬💻 #PlantScience #Research
https://www.izmb.uni-bonn.de/en/homepage?set_language=en

While the Botanical Garden is quiet in winter, here is a stunning shot of the giant water lily, Victoria cruziana! 🌿 Curious about the...

While the Botanical Garden is quiet in winter, here is a stunning shot of the giant water lily, Victoria cruziana! 🌿 Curious about the molecular secrets behind its vibrant pigmentation? Dive into the research: https://doi.org/10.1101/2024.06.15.599162
#BotanicalBeauty #PlantScience #MolecularBiology
@PuckerLab @tubraunschweig

🚀 Ready to master #Python?Today, we are diving into file handling! 📝 Learn how to:✔️ Read data from a file✔️ Write results to...

🚀 Ready to master #Python?
Today, we are diving into file handling! 📝 Learn how to:
✔️ Read data from a file
✔️ Write results to an output file

🔗 Check out the slides: https://github.com/bpucker/teaching
#Coding #TechTutorial #LearnPython
@PuckerLab @tubraunschweig

A new cohort of highly motivated life science students embarks on an exciting journey to explore the power of #Python and...

A new cohort of highly motivated life science students embarks on an exciting journey to explore the power of #Python and #Bioinformatics
@PuckerLab @tubraunschweig

Sweet news this winter! 🍫❄️ We have sequenced a cacao genome - just in time for the cozy...

Sweet news this winter! 🍫❄️ We have sequenced a cacao genome - just in time for the cozy season:

https://doi.org/10.1101/2024.11.23.624982

#ChocolateScience #WinterWonders #Genomics
@PuckerLab @tubraunschweig

The color difference between magenta and white flowers in Digitalis purpurea is linked to a large insertion in the DFR gene of white...

The color difference between magenta and white flowers in Digitalis purpurea is linked to a large insertion in the DFR gene of white flowering plants, likely making DFR non-functional and blocking anthocyanin biosynthesis:
https://doi.org/10.1101/2024.02.14.580303
#PlantSci #Pigmentation
@PuckerLab

Excited to share that our work on the tillandsioids' transition from land to air got...

Excited to share that our work on the tillandsioids' transition from land to air got published:
https://doi.org/10.1038/s41467-024-53756-7

@PuckerLab @tubraunschweig

Excited to share the release of our Tropaeolum majus genome sequence and annotation:https://doi.org/10.1101/2024.11.01.621629#Genomics...

Excited to share the release of our Tropaeolum majus genome sequence and annotation:
https://doi.org/10.1101/2024.11.01.621629
#Genomics #LongReadSequencing

@PuckerLab @tubraunschweig

🚀 Exciting news for genome enthusiasts! 🎉 Our latest MGSE update now supports long reads and contains new data analyses for...

🚀 Exciting news for genome enthusiasts! 🎉 Our latest MGSE update now supports long reads and contains new data analyses for mapping-based genome size estimation. Curious about the details? Check it out: https://doi.org/10.1101/607390
#Genomics #Bioinformatics #Python
@PuckerLab

Presenting the research of our group in front of the new TU Braunschweig biology students at Burg Warberg...

Presenting the research of our group in front of the new TU Braunschweig biology students at Burg Warberg #PlantSci

https://tu-braunschweig.de/en/ifp/pbb
@PuckerLab

Exciting news for cassava lovers! 🥳 We have just released the phased genome sequence and annotation for the virus-resistant cultivar...

Exciting news for cassava lovers! 🥳 We have just released the phased genome sequence and annotation for the virus-resistant cultivar COL40. Key finding: a large region of repetitive elements on chromosome 12

🔗 https://doi.org/10.1101/2024.09.30.615795
#Genomics #Cassava #Research
@PuckerLab @tubraunschweig

Excited to announce the discovery of a withanolide biosynthetic gene cluster! A huge achievement from our collaboration with the Franke Lab....

Excited to announce the discovery of a withanolide biosynthetic gene cluster! A huge achievement from our collaboration with the Franke Lab. Explore the findings here:

https://doi.org/10.1101/2024.09.27.614867

#ComparativeGenomics #Biochemistry
@tubraunschweig @PuckerLab @unihannover

Thrilled to announce the publication of Nancy's work in PLO SONE:Mechanisms mitigating competition between FLS and...

Thrilled to announce the publication of Nancy's work in PLO SONE:
Mechanisms mitigating competition between FLS and DFR
https://doi.org/10.1371/journal.pone.0305837
#PlantScience #OpenAccess #BigData
@PuckerLab